Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954959.1_cds_XP_016493650.1_83738
CDS Infomation

[gene=LOC107812969] [db_xref=GeneID:107812969] [protein=premnaspirodiene oxygenase-like isoform X2] [protein_id=XP_016493650.1] [location=complement(join(5903..6523,7171..8049))] [gbkey=CDS]
Sequence

ATGCAGTTCTTCAACTTCTTTTCGCTTTTCCTTTTTGTGTCATTCCTCTTTTTATTTAAG
AAATGGAAGAATTCCAATAGCCAAACCAAAAGATTGCCTCCAGGTCCATGGAAATTACCT
ATTCTTGGAAGCATGCTTCATATGCTAGGTGGACTGCCACATCATGTCCTTAGAGATTTA
GCCAAAAAATATGGACCAATTATGCACCTTCAACTAGGCGAAGTTTCTCTAGTTGTTATT
ACTTCTCCTGAGATGGCAAAAGAAGTACTAAAAACTCATGACCTTGCTTTTGCAAATAGG
CCTTTACTTGTAGCTGCCAAGATTTTTTCTTATAATTGCATGGACATTGCCTTTTCTCCT
TATGGCAATTACTGGAGACAAATGCGTAAAATTTGTCTCTTGGAATTGCTCAGTGCCAAA
AATGTCAAGTCATTCAACTCAATTAGACAAGATGAAGTTCATCGTATGATTGAATTTTTT
CGATCATCTCCTGGTAAGCCAGTTAATGTTACAAAAAGGATTTCACTTTTCACAAACTCT
ATGACATGTAGATCAGCATTTGGACAAGAATATAAGGAGCAAGACGAATTTGTACAACTA
GTCAAAAAAGTGTCAAACTTAATAGAAGGGTTTGATGTGGCTGATATATTCCCTTCACTG
AAGTTTCTTCATGTGCTCACTGGAATGAAGGCTAAAGTTATGAATACACACAATGAATTA
GATGCCATTCTTGAAAATATCATCAATGAGCACAAGAAGACTTCAAAGAGCGATGGTGAA
TCAGGAGGTGAAGGTATAATTGGTGTACTGCTAAGACTTATGAAAGAGGGAGGCCTTCAA
TTTCCAATCACTAACGACAACATCAAAGCTATCATTTCTGACCTATTTGCTGCGGGAACA
GAAACTTCATCAACAACAATTAATTGGGCCATGGTCGAAATGATGAAGAATCCAAGTGTA
TTTTCCAAAGCTCAAGCAGAGGTAAGAAAAATCTTGAGAGGGAAAGAAACTTTTGGTGAA
ATTGATGTCGAGGAGTTCAAATACCTAAAAATGGTCATTAAAGAAACTTTCAGACTCCAT
CCTGCACTACCTCTTTTGCTTCCAAGAGAATGTAGAGAAGAAACAGACTTAAACGGCTAC
ACTATTCCATTGAAAACAAAAGTCGTGGTTAATGTTTGGGCAATGGGAAGAGATCCAAAA
TATTGGGATGACGTAGAAAGCTTTAAACCTGAGAGATTTGAACACAACTCTATGGATTAT
ATTGGTAATAATTATGAATATCTTCCCTTTGGTAGCGGAAGGAGAATTTGCCCTGGAATA
TCATTTGGTTTAGCAAATGTTTATTTTCCACTGGCTCAACTGTTGTATCACTTTGACTGG
AAACTCCCAACTGGAATCAATCCAAGTGAACTGGACTTGACCGAGGCGGCTGGAGTAGCT
TGTGCTACAAAGAATGACCTACACTTGATCGCTACTCCTTATCAACATTGTCAAGAGTGA

Peptide Sequence

PEP ID

XP_016493650.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like isoform X2 [Nicotiana tabacum]
Sequence

MQFFNFFSLFLFVSFLFLFKKWKNSNSQTKRLPPGPWKLPILGSMLHMLGGLPHHVLRDL
AKKYGPIMHLQLGEVSLVVITSPEMAKEVLKTHDLAFANRPLLVAAKIFSYNCMDIAFSP
YGNYWRQMRKICLLELLSAKNVKSFNSIRQDEVHRMIEFFRSSPGKPVNVTKRISLFTNS
MTCRSAFGQEYKEQDEFVQLVKKVSNLIEGFDVADIFPSLKFLHVLTGMKAKVMNTHNEL
DAILENIINEHKKTSKSDGESGGEGIIGVLLRLMKEGGLQFPITNDNIKAIISDLFAAGT
ETSSTTINWAMVEMMKNPSVFSKAQAEVRKILRGKETFGEIDVEEFKYLKMVIKETFRLH
PALPLLLPRECREETDLNGYTIPLKTKVVVNVWAMGRDPKYWDDVESFKPERFEHNSMDY
IGNNYEYLPFGSGRRICPGISFGLANVYFPLAQLLYHFDWKLPTGINPSELDLTEAAGVA
CATKNDLHLIATPYQHCQE

Transcript Sequence

Gene sequence data has not been registered.